reaction
mixture if not using a thermal cycler with a heated
lid. Place the tube in the thermal cycler when the
thermal cycler reaches 95 oC, and run the
following PCR program.
95 oC for
reaction
mixture if not using a thermal cycler with a heated
lid. Place the tube in the thermal cycler when the
thermal cycler reaches 95oC, and run the following
PCR program.
94oC for 2 min
mixture if not using a thermal cycler with a heated
lid.
Place the tube in the thermal cycler when the
thermal cycler reaches 95oC, and run the following
PCR program.
94oC for
Items common to all procedures:
• Tubes or plates for PCR
• PCR primers, Cat. No. OLIGO
• Thermal Cycler
• Water, PCR Reagent, Cat. No. W1754
For individual 1.5
reaction
mixture if not using a thermal cycler with a heated
lid. Place the tube in the thermal cycler when the
thermal cycler reaches 95oC, and run the
following PCR program.
95oC for 2
preparing PCR mixes and dilutions
• PCR reaction vessels, such as 0.2 ml thin-walled PCR tubes or plates
• Standard benchtop microcentrifuge
• Thermal block cycler
For standard and hot start PCR
• PCR
complex PCR targets. Betaine (0.8–1.3 M) has
been reported to improve the amplification of DNA by
reducing secondary structure in GC-rich regions.1
Thermal Cycler
Perkin-Elmer DNA Cyclers 480, 2400
reaction
mixture if not using a thermal cycler with a heated
lid. Place the tube in the thermal cycler when the
thermal cycler reaches 95 oC, and run the following
PCR program.
95 oC for
or 0.5 ml thin-walled PCR tubes, Catalog
Numbers P3114 and P3364 or plates for specific
thermal cycler
• Thermal cycler
• Mineral Oil, Catalog Number M8662 (optional)
Precautions and Disclaimer
Quantitative PCR,
Product Code D 7440 for use with molecular
beacons or dual-labeled probe detection
• Water, PCR reagent, Product Code W 1754
• Primers
• DNA template
• Thermal cycler for quantitative
Items common to all procedures:
• Tubes or plates for PCR
• PCR primers, Cat. No. OLIGO
• Thermal Cycler
• Water, PCR Reagent, Cat. No. W1754
For individual 1.5
considered fast, while slow cyclers typically have ramp
rates from 1–3°C/sec. The slower the ramp speed, the
shorter the hold time required.
Standard cycling
(fast cyclers)
Ramp rate >3°C/sec
Provided)
Items common to all procedures:
• Tubes or plates for PCR
• PCR primers, Cat. No. OLIGO
• Thermal cycler
• Water, PCR grade, Cat. No. W1754
For individual
Provided)
Items common to all procedures:
• Tubes or plates for PCR
• PCR primers, Cat. No. OLIGO
• Thermal cycler
• Water, PCR grade, Cat. No. W1754
For individual
two-step RT-PCR, using
qualitative RT-PCR on conventional thermal cyclers or quantitative RT-PCR on the LightCycler® Carousel-Based
System, the LightCycler® 480 System, or other real-time PCR instruments
required but not provided
• Template to be amplified
• Primers
• Thermal cycler
• Dedicated pipettes
• PCR pipette tips
• 0.2 or 0.5 ml PCR microcentrifuge tubes,
thin-walled, Catalog Numbers P3114 and P3364
prevent evaporation if using a thermal cycler
without a heated lid.
4. The amplification parameters will vary depending
on the primers and the thermal cycler used. It may
be necessary to optimize
PCR
The following thermal profile is an example. Different thermal cyclers may require different profiles.
Overlay the reaction carefully with mineral oil if required by the thermal cycler.
plates for specific thermal cycler
• Thermal cycler for quantitative PCR
Precautions and Disclaimer
This product is for R&D use only, not for drug,
household, or other uses. Please consult the Material
prevent evaporation if using a thermal cycler
without a heated lid.
4. The amplification parameters will vary depending
on the primers and the thermal cycler used. It may
be necessary to optimize
be 100 – 500 nM.
ROX Reference Dye
For certain real-time cyclers, the presence of the passive
reference dye, ROX, compensates for non-PCR related
variations in fluorescence detection. Fluorescence
skirted and full-skirted PCR plates as well as deep-
well plates
NOT recommended for qPCR
Bundling Opportunities
PCR plates
PCR reagents
Thermal cyclers
Perkin-Elmer DNA Cycler 480 has been used to
develop cycling parameters. Other types of thermal
cyclers can also be used, but may require further
optimization of cycling parameters.
Primer design