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  • Parasegetibacter terrae sp. nov., isolated from paddy soil and emended description of the genus Parasegetibacter.

Parasegetibacter terrae sp. nov., isolated from paddy soil and emended description of the genus Parasegetibacter.

International journal of systematic and evolutionary microbiology (2014-10-08)
Soo-Jin Kim, Jae-Hyung Ahn, Hang-Yeon Weon, Seung-Beom Hong, Soon-Ja Seok, Soon-Wo Kwon
ABSTRACT

A Gram-stain-negative, variably shaped, non-flagellated, yellow-pigmented, aerobic bacterium, designated strain SGM2-10(T), was isolated from a paddy soil sample from the Suwon region, South Korea. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the isolate was related most closely to Parasegetibacter luojiensis RHYL-37(T). Strain SGM2-10(T) showed highest 16S rRNA gene sequence similarity to P. luojiensis RHYL-37(T) (95.1 %), Flavitalea populi HY-50R(T) (95.0 %) and Flavitalea gansuensis JCN-23(T) (94.4 %). No other species in the family Chitinophagaceae shared more than 94.1 % 16S rRNA gene sequence similarity with strain SGM2-10(T). The major fatty acids of strain SGM2-10(T) were iso-C15 : 0, iso-C15 : 1 G and iso-C17 : 0 3-OH. The only menaquinone was MK-7. The polar lipids comprised phosphatidylethanolamine, seven unknown lipids and ten unknown aminolipids. The G+C content of the DNA of strain SGM2-10(T) was 46.7 mol%. On the basis of the results of the polyphasic characterization presented in this study, it is concluded that strain SGM2-10(T) represents a novel species of the genus Parasegetibacter, for which the name Parasegetibacter terrae sp. nov. is proposed. The type strain is SGM2-10(T) ( = KACC 17341(T) = JCM 19942(T)). The description of the genus Parasegetibacter has also been emended.

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
L-α-Phosphatidylethanolamine from egg yolk, Type III, 10 mg/mL in chloroform, ≥97%, solution
Sigma-Aldrich
L-α-Phosphatidylethanolamine from Glycine max (soybean), Type IV, ≥98% (TLC), lyophilized powder
Sigma-Aldrich
L-α-Phosphatidylethanolamine from egg yolk, Type III, ≥97% (TLC), lyophilized powder