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  • Detection of autosomal dominant polycystic kidney disease by NMR spectroscopic fingerprinting of urine.

Detection of autosomal dominant polycystic kidney disease by NMR spectroscopic fingerprinting of urine.

Kidney international (2011-03-11)
Wolfram Gronwald, Matthias S Klein, Raoul Zeltner, Bernd-Detlef Schulze, Stephan W Reinhold, Markus Deutschmann, Ann-Kathrin Immervoll, Carsten A Böger, Bernhard Banas, Kai-Uwe Eckardt, Peter J Oefner
ABSTRACT

Autosomal dominant polycystic kidney disease (ADPKD) is a frequent cause of kidney failure; however, urinary biomarkers for the disease are lacking. In a step towards identifying such markers, we used multidimensional-multinuclear nuclear magnetic resonance (NMR) spectroscopy with support vector machine-based classification and analyzed urine specimens of 54 patients with ADPKD and slightly reduced estimated glomerular filtration rates. Within this cohort, 35 received medication for arterial hypertension and 19 did not. The results were compared with NMR profiles of 46 healthy volunteers, 10 ADPKD patients on hemodialysis with residual renal function, 16 kidney transplant patients, and 52 type 2 diabetic patients with chronic kidney disease. Based on the average of 51 out of 701 NMR features, we could reliably discriminate ADPKD patients with moderately advanced disease from ADPKD patients with end-stage renal disease, patients with chronic kidney disease of other etiologies, and healthy probands with an accuracy of >80%. Of the 35 patients with ADPKD receiving medication for hypertension, most showed increased excretion of proteins and also methanol. In contrast, elevated urinary methanol was not found in any of the control and other patient groups. Thus, we found that NMR fingerprinting of urine differentiates ADPKD from several other kidney diseases and individuals with normal kidney function. The diagnostic and prognostic potential of these profiles requires further evaluation.

MATERIALS
Product Number
Brand
Product Description

Supelco
L-Proline, certified reference material, TraceCERT®, Manufactured by: Sigma-Aldrich Production GmbH, Switzerland
Salicylic acid, European Pharmacopoeia (EP) Reference Standard
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Ethanol-25, 25 mg/dL in H2O, ampule of 10 × 1.2 mL, certified reference material, Cerilliant®
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Methylmalonic acid solution, 1.0 mg/mL in acetonitrile, ampule of 1 mL, certified reference material, Cerilliant®
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Acetone, Pharmaceutical Secondary Standard; Certified Reference Material
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Ethanol-400 (10 ampules/kit), 400 mg/dL in H2O, ampule of 10 × 1.2 mL, certified reference material, Cerilliant®
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Ethanol-500, 500 mg/dL in H2O, ampule of 10 × 1.2 mL, certified reference material, Cerilliant®
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Ethanol-20 (10 ampules/kit), 20 mg/dL in H2O, ampule of 10 × 1.2 mL, certified reference material, Cerilliant®
Mannitol, European Pharmacopoeia (EP) Reference Standard
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Methanol, suitable for NMR (reference standard)
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Methanol, purification grade, 99.8%
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Salicylic acid, 1.0 mg/mL in acetonitrile, ampule of 1 mL, certified reference material, Cerilliant®
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Glycolic acid, certified reference material, TraceCERT®, Manufactured by: Sigma-Aldrich Production GmbH, Switzerland
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Salicylic acid, ACS reagent, ≥99.0%
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Acetic acid, ≥99.5%, FCC, FG
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Methylamine solution, 33 wt. % in absolute ethanol ((denatured with 1% toluene))
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β-Alanine, 99%
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L-Proline, 99%, FCC, FG
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Hippuric acid, 98%
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Ethanolamine, purified by redistillation, ≥99.5%
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Acetone, natural, ≥97%
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Salicylic acid, ≥99%, FG
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Acetone, ≥99%, FCC, FG
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Reagent Alcohol, anhydrous, ≤0.003% water
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L-Threonine, certified reference material, TraceCERT®, Manufactured by: Sigma-Aldrich Production GmbH, Switzerland
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L-Valine, certified reference material, TraceCERT®, Manufactured by: Sigma-Aldrich Production GmbH, Switzerland
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L-Cystine, certified reference material, TraceCERT®, Manufactured by: Sigma-Aldrich Production GmbH, Switzerland
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L-Threonine, Pharmaceutical Secondary Standard; Certified Reference Material
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