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  • The capability of endophytic fungi for production of hemicellulases and related enzymes.

The capability of endophytic fungi for production of hemicellulases and related enzymes.

BMC biotechnology (2013-11-02)
Diogo Robl, Priscila da Silva Delabona, Carla Montanari Mergel, Juan Diego Rojas, Patrícia Dos Santos Costa, Ida Chapaval Pimentel, Vania Aparecida Vicente, José Geraldo da Cruz Pradella, Gabriel Padilla
ABSTRACT

There is an imperative necessity for alternative sources of energy able to reduce the world dependence of fossil oil. One of the most successful options is ethanol obtained mainly from sugarcane and corn fermentation. The foremost residue from sugarcane industry is the bagasse, a rich lignocellulosic raw material uses for the production of ethanol second generation (2G). New cellulolytic and hemicellulytic enzymes are needed, in order to optimize the degradation of bagasse and production of ethanol 2G. The ability to produce hemicellulases and related enzymes, suitable for lignocellulosic biomass deconstruction, was explored using 110 endophytic fungi and 9 fungi isolated from spoiled books in Brazil. Two initial selections were performed, one employing the esculin gel diffusion assay, and the other by culturing on agar plate media with beechwood xylan and liquor from the hydrothermal pretreatment of sugar cane bagasse. A total of 56 isolates were then grown at 29°C on steam-exploded delignified sugar cane bagasse (DEB) plus soybean bran (SB) (3:1), with measurement of the xylanase, pectinase, β-glucosidase, CMCase, and FPase activities. Twelve strains were selected, and their enzyme extracts were assessed using different substrates. Finally, the best six strains were grown under xylan and pectin, and several glycohydrolases activities were also assessed. These strains were identified morphologically and by sequencing the internal transcribed spacer (ITS) regions and the partial β-tubulin gene (BT2). The best six strains were identified as Aspergillus niger DR02, Trichoderma atroviride DR17 and DR19, Alternaria sp. DR45, Annulohypoxylon stigyum DR47 and Talaromyces wortmannii DR49. These strains produced glycohydrolases with different profiles, and production was highly influenced by the carbon sources in the media. The selected endophytic fungi Aspergillus niger DR02, Trichoderma atroviride DR17 and DR19, Alternaria sp. DR45, Annulohypoxylon stigyum DR47 and Talaromyces wortmannii DR49 are excellent producers of hydrolytic enzymes to be used as part of blends to decompose sugarcane biomass at industrial level.

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
Cellulase from Aspergillus niger, powder, off-white, ~0.8 U/mg
Sigma-Aldrich
β-Glucosidase from almonds, lyophilized, powder, ≥4 U/mg
Sigma-Aldrich
Cellulase from Aspergillus sp., aqueous solution
Sigma-Aldrich
β-Glucosidase from almonds, lyophilized powder, 10-50 units/mg solid
Sigma-Aldrich
β-Glucosidase from almonds, lyophilized powder, ≥2 units/mg solid
Sigma-Aldrich
Cellulase from Aspergillus niger, powder, ≥0.3 units/mg solid
Sigma-Aldrich
Cellulase from Trichoderma sp., BioReagent, suitable for plant cell culture, 3-10 units/mg solid
Sigma-Aldrich
Cellulase from Trichoderma reesei ATCC 26921, lyophilized powder, ≥1 unit/mg solid
Sigma-Aldrich
Cellulase from Trichoderma reesei, aqueous solution, ≥700 units/g
Sigma-Aldrich
Cellulase from Trichoderma sp., powder, ≥5,000 units/g solid