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  • Accumulation of d-glucose from pentoses by metabolically engineered Escherichia coli.

Accumulation of d-glucose from pentoses by metabolically engineered Escherichia coli.

Applied and environmental microbiology (2015-03-10)
Tian Xia, Qi Han, William V Costanzo, Yixuan Zhu, Jeffrey L Urbauer, Mark A Eiteman
ABSTRACT

Escherichia coli that is unable to metabolize d-glucose (with knockouts in ptsG, manZ, and glk) accumulates a small amount of d-glucose (yield of about 0.01 g/g) during growth on the pentoses d-xylose or l-arabinose as a sole carbon source. Additional knockouts in the zwf and pfkA genes, encoding, respectively, d-glucose-6-phosphate 1-dehydrogenase and 6-phosphofructokinase I (E. coli MEC143), increased accumulation to greater than 1 g/liter d-glucose and 100 mg/liter d-mannose from 5 g/liter d-xylose or l-arabinose. Knockouts of other genes associated with interconversions of d-glucose-phosphates demonstrate that d-glucose is formed primarily by the dephosphorylation of d-glucose-6-phosphate. Under controlled batch conditions with 20 g/liter d-xylose, MEC143 generated 4.4 g/liter d-glucose and 0.6 g/liter d-mannose. The results establish a direct link between pentoses and hexoses and provide a novel strategy to increase carbon backbone length from five to six carbons by directing flux through the pentose phosphate pathway.

MATERIALS
Product Number
Brand
Product Description

Xylose, European Pharmacopoeia (EP) Reference Standard
Sigma-Aldrich
D-(+)-Xylose, BioXtra, ≥99% (GC)
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D-(+)-Xylose, ≥99% (GC)
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Trifluoroacetic acid, analytical standard
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Hexamethyldisilazane, ReagentPlus®, 99.9%
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Hexamethyldisilazane, reagent grade, ≥99%
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Pyridine, analytical standard
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D-(+)-Xylose, BioUltra, ≥99.0% (sum of enantiomers, HPLC)
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Hexamethyldisilazane, derivatization grade (GC derivatization), LiChropur, ≥99.0% (GC)
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Pyridine, anhydrous, 99.8%
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Pyridine, ≥99%
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Hexamethyldisilazane, Wacker Chemie AG, ≥97.0% (GC)
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Pyridine, Pharmaceutical Secondary Standard; Certified Reference Material
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Pyridine, ReagentPlus®, ≥99%
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Trifluoroacetic acid, puriss. p.a., suitable for HPLC, ≥99.0% (GC)
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Pyridine, biotech. grade, ≥99.9%
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Trifluoroacetic acid, ≥99%, for protein sequencing
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Pyridine, ReagentPlus®, ≥99%
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Pyridine, puriss. p.a., ACS reagent, reag. Ph. Eur., ≥99.5% (GC)
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Pyridine, ACS reagent, ≥99.0%
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Pyridine, ACS reagent, ≥99.0%
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Trifluoroacetic acid, ReagentPlus®, 99%
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Trifluoroacetic acid, suitable for HPLC, ≥99.0%
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Pyridine, suitable for HPLC, ≥99.9%