Skip to Content
Merck
CN
  • Ametantrone-based compounds as potential regulators of Tau pre-mRNA alternative splicing.

Ametantrone-based compounds as potential regulators of Tau pre-mRNA alternative splicing.

Organic & biomolecular chemistry (2014-11-06)
Gerard Artigas, Paula López-Senín, Carlos González, Núria Escaja, Vicente Marchán
ABSTRACT

Tau pre-mRNA contains a stem-loop structure involved in the regulation of the alternative splicing of tau protein. We describe here a new family of Tau RNA ligands selected by dynamic combinatorial chemistry based on the combination of ametantrone with small RNA-binding molecules. The most promising compound results from derivatization of one of the side chains of the anthraquinone ring with the small aminoglycoside neamine through a short spacer. This compound binds the RNA target with a high affinity in a preferred binding site, in which the heteroaromatic moiety intercalates in the bulged region of the stem-loop and its side chains and neamine interact with the major groove of the RNA. Importantly, binding of this compound to mutated RNA sequences involved in the onset of some tauopathies such as FTDP-17 restores their thermodynamic stability to a similar or even higher levels than that of the wild-type sequence, thereby revealing its potential as a modulator of Tau pre-mRNA splicing.

MATERIALS
Product Number
Brand
Product Description

Supelco
Water, suitable for ion chromatography
Supelco
Water, for TOC analysis
Sigma-Aldrich
Ammonium citrate tribasic, ≥97% (titration)
Sigma-Aldrich
E-Toxate Water, endotoxin, free
Sigma-Aldrich
Water, Nuclease-Free Water, for Molecular Biology
Sigma-Aldrich
Water, PCR Reagent
Sigma-Aldrich
Water, sterile-filtered, BioReagent, suitable for cell culture
Sigma-Aldrich
Water, for embryo transfer, sterile-filtered, BioXtra, suitable for mouse embryo cell culture
Sigma-Aldrich
2,4-Dihydroxybenzoic acid, 97%
Sigma-Aldrich
Water, tested according to Ph. Eur.
Supelco
Water, suitable for HPCE, suitable for luminescence, suitable for UV/Vis spectroscopy
Sigma-Aldrich
Water, for cell biology, sterile ultrafiltered
Supelco
Density Standard 998 kg/m3, H&D Fitzgerald Ltd. Quality
Sigma-Aldrich
Water, BioPerformance Certified
Supelco
Water, for ultratrace analysis, ACS reagent
Sigma-Aldrich
Water, Deionized
Sigma-Aldrich
Water, Molecular Biology, sterile filtered
Pure Water Density Standard, UKAS ISO/IEC17025 and ISO Guide 34 certified, density: 0.9982 g/mL at 20 °C, density: 0.9970 g/mL at 25 °C
Pure Water Density Standard, UKAS ISO/IEC17025 and ISO Guide 34 certified, density: 0.9982 g/mL at 20 °C, density: 0.9970 g/mL at 25 °C
Sigma-Aldrich
Water, suitable for HPLC
Sigma-Aldrich
Water, HPLC Plus
Sigma-Aldrich
Water, ACS reagent
Sigma-Aldrich
Trifluoroacetic acid, puriss. p.a., suitable for HPLC, ≥99.0% (GC)
Sigma-Aldrich
Trifluoroacetic acid, ≥99%, for protein sequencing
Sigma-Aldrich
Trifluoroacetic acid, suitable for HPLC, ≥99.0%
Supelco
Trifluoroacetic acid, analytical standard
Sigma-Aldrich
2′,4′,6′-Trihydroxyacetophenone monohydrate, 98%
Supelco
2′,4′,6′-Trihydroxyacetophenone monohydrate, suitable for matrix substance for MALDI-MS, ≥99.5%
Sigma-Aldrich
Trifluoroacetic acid, ReagentPlus®, 99%