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  • [Identification of a novel allele HLA-B*15:129 by polymerase chain reaction with allele group-specific primers].

[Identification of a novel allele HLA-B*15:129 by polymerase chain reaction with allele group-specific primers].

Zhonghua yi xue yi chuan xue za zhi = Zhonghua yixue yichuanxue zazhi = Chinese journal of medical genetics (2011-06-07)
Zhe-dong Han, Wei Wang, Wei Zhang, Jun-jun He, Nan-ying Chen, Fa-ming Zhu, Hang-jun Lv, Li-xing Yan
摘要

To analyze the sequence of the exons 2-4 of human leukocyte antigen (HLA) novel allele HLA-B*15:129. DNA of the proband was extracted from whole blood by commercial DNA extraction kit. The amplification for HLA-B exons 2-4 was performed separately by polymerase chain reaction (PCR) with allele group specific primers. The PCR products were digested with enzymes and then directly sequenced for exons 2-4 of HLA-B locus in both directions. Sequencing results showed the HLA-B alleles of the proband included B*07:02 and a novel allele. The sequence of the novel allele has been submitted to GenBank (accession no. EF473219) and the allele has been officially named B*15:129 by the WHO Nomenclature Committee. Comparing with the HLA-B*15:01:01:01, the sequence of exons 2-4 of HLA-B*15:129 showed three nucleotide difference in exon 3 at positions 362 and 363 from GG to AT and positions 369 from C to T, which resulted in an amino acid change from Arg to Asn at codon 97. A novel HLA-B allele was identified and has been officially named B15:129 by the WHO Nomenclature Committee.