For additional resources on gel electrophoresis equipment and reagents, please visit our Electrophoresis Systems & Transfer Equipment resource hub.
Auto2D® Device IEF Chip pH3-10 and IEF Chip pH3-10NL
Auto2D® Plus mode is the improved operation mode. It actively loads proteins into a wet gel by applying voltage. Compared with Auto2D® mode, which adopted a conventional electrophoresis method, the sample loading efficiency is very high with a 30-minute shorter run time. Because larger protein amounts can be applied and the protein absorption rate into the gel is higher with Auto2D® Plus mode, you can detect more spots compared to the Auto2D® mode. In the Auto2D® Plus mode, there are some new features to simplify sample preparation, including Desalt recipes and Auto-Stain recipes. Auto2D® Plus mode is highly recommended unless you need to keep consistency with previous data obtained by the Auto2D® mode
If you would like to analyze proteins comprehensively, select the IEF chip pH3-10 or pH3-10NL. If you would like to have better resolution in narrower pH range, select the IEF chip pH4-7 or pH6-10. If you want to analyze specific proteins, select the IEF chip pH4-5.5, pH5-6.5 or pH7-10.
Auto2D® IEF Chip Selection
The separation range (kDa) of each PAGE chip (6.5%, 7.5%, 10%, and 12.5%) is shown in the figures below.
Auto2D® IEF PAGE Chip Selection
We recommend the following ampholytes.
For the IEF chip pH3-10NL:
For the IEF chip pH3-10:
For the IEF chip pH4-7, pH4-5.5, and pH5-6.5:
For the IEF chip pH6-10 and pH7-10:
The sample amount depends on the detection method. The recommended sample amounts are as follows.
Samples can be pre-labeled using fluorescence dye reagent prior to electrophoresis. In 2-D electrophoresis, it is necessary to use dyes that do not affect the isoelectric point (total charge) of the proteins. Proven methods include the following.
It depends on the type of the detergent and the concentration. Ionic detergents with strong polarity cannot be used. For example, if the sample contains SDS, dilute it appropriately or remove it using a 2-D Clean-Up Kit. In some cases, the nonionic (uncharged) detergents such as DDM can be used. If possible, use CHAPS, which is the same as included in Rehydration Solution.
We often use the 2D Clean Up Kit and Zeba™ desalt spin columns for sample preparation. We recommend the 2D Clean-Up kit for low-concentration samples to ensure maximal sample retention. The Zeba™ desalt spin column is faster than the 2D Clean Up kit and we recommend it for samples of sufficient concentration as there is slight sample loss during concentration.
We recommend the following for sample preparation using IP.
You can utilize each graph as indicators of a successful 2DE and as to improve sample preparation. The current peak at 200V comes from the charged small molecules such as salts. The current peaks at about 1000V comes from charged medium-sized molecules, such as lipids and peptides. The current peak at the high-voltage step comes from the charged larger-sized molecules, such as proteins and nucleic acids. If the current at the final step of the IEF process is stable below 50 µA, the successful separation is likely to occur. In the IEF, the current value gradually decreases and settles as the sample proteins have been focused on their Individual isoelectric points.
Auto2D® Device Voltage and Current Graphs
Yes, alkylation of cysteine during automatic operation is possible. Apply 700 µL of Equilibration Buffer containing 2-3% iodoacetamide to the vacant Equilibration groove 2 of the solution chip. And edit the recipe as follows.
Auto2D® Device Alkylation of Cysteine
4. Save it as a new recipe.
You can perform the 2DE in the non-reducing environment by preparing the Working Rehydration Solution and or the Equilibration Buffer without DTT. If you perform the 2nd dimension in the non-reducing environment, we recommend using Equilibration Buffer with urea.
Equilibration Buffer with Urea: 7.5M Urea, 20w/v% Glycerol, 125 mM Tris HCl pH6.8, 5w/v% SDS, 0.01w/v% BPB
You can perform the 2DE in the native environment, such as "Native-IEF x SDS-PAGE" or "Native-IEF x Native-PAGE" by replacing the reagents. However, the basic proteins cannot be separated with Native-PAGE.
For additional resources on gel electrophoresis equipment and reagents, please visit our Electrophoresis Systems & Transfer Equipment resource hub.
Ordering Information |
---|
如要继续阅读,请登录或创建帐户。
暂无帐户?