Merck
CN
  • Multi-target spectral moment QSAR versus ANN for antiparasitic drugs against different parasite species.

Multi-target spectral moment QSAR versus ANN for antiparasitic drugs against different parasite species.

Bioorganic & medicinal chemistry (2010-02-27)
Francisco J Prado-Prado, Xerardo García-Mera, Humberto González-Díaz
摘要

There are many of pathogen parasite species with different susceptibility profile to antiparasitic drugs. Unfortunately, almost QSAR models predict the biological activity of drugs against only one parasite species. Consequently, predicting the probability with which a drug is active against different species with a single unify model is a goal of the major importance. In so doing, we use Markov Chains theory to calculate new multi-target spectral moments to fit a QSAR model that predict by the first time a mt-QSAR model for 500 drugs tested in the literature against 16 parasite species and other 207 drugs no tested in the literature using spectral moments. The data was processed by linear discriminant analysis (LDA) classifying drugs as active or non-active against the different tested parasite species. The model correctly classifies 311 out of 358 active compounds (86.9%) and 2328 out of 2577 non-active compounds (90.3%) in training series. Overall training performance was 89.9%. Validation of the model was carried out by means of external predicting series. In these series the model classified correctly 157 out 190, 82.6% of antiparasitic compounds and 1151 out of 1277 non-active compounds (90.1%). Overall predictability performance was 89.2%. In addition we developed four types of non Linear Artificial neural networks (ANN) and we compared with the mt-QSAR model. The improved ANN model had an overall training performance was 87%. The present work report the first attempts to calculate within a unify framework probabilities of antiparasitic action of drugs against different parasite species based on spectral moment analysis.

材料
货号
品牌
产品描述

Sigma-Aldrich
地塞米松, powder, BioReagent, suitable for cell culture, ≥97%
Sigma-Aldrich
溴化十六烷基三甲铵, ≥98%
Sigma-Aldrich
L -抗坏血酸, 99%
Sigma-Aldrich
D -甘露醇, ≥98% (GC)
Sigma-Aldrich
溴化十六烷基三甲铵, for molecular biology, ≥99%
Sigma-Aldrich
L -抗坏血酸, ACS reagent, ≥99%
Sigma-Aldrich
L -抗坏血酸, powder, suitable for cell culture, γ-irradiated
Sigma-Aldrich
L -抗坏血酸, suitable for cell culture, suitable for plant cell culture, ≥98%
Sigma-Aldrich
利福平, ≥95% (HPLC), powder or crystals
Sigma-Aldrich
L -抗坏血酸, BioXtra, ≥99.0%, crystalline
Sigma-Aldrich
丙戊酸 钠盐, 98%
Sigma-Aldrich
β-雌二醇, BioReagent, powder, suitable for cell culture
Sigma-Aldrich
左旋多巴, ≥98% (TLC)
Sigma-Aldrich
乙酰水杨酸, ≥99.0%
Sigma-Aldrich
β-雌二醇, ≥98%
Sigma-Aldrich
D -甘露醇, ACS reagent
Sigma-Aldrich
布洛芬, ≥98% (GC)
Sigma-Aldrich
羟基脲, 98%, powder
Sigma-Aldrich
溴化十六烷基三甲铵, BioXtra, ≥99%
Sigma-Aldrich
甲氧苄啶, ≥98.5%
Sigma-Aldrich
吲哚美辛, 98.5-100.5% (in accordance with EP)
Sigma-Aldrich
胞嘧啶 β-D-呋喃阿拉伯糖苷, crystalline, ≥90% (HPLC)
Sigma-Aldrich
红霉素, BioReagent, suitable for cell culture
Sigma-Aldrich
6-氨基己酸, ≥99% (titration), powder
Sigma-Aldrich
前列腺素 E1, ≥98% (HPLC), synthetic
Sigma-Aldrich
黄体酮, ≥99%
Sigma-Aldrich
L -抗坏血酸, reagent grade, crystalline
Sigma-Aldrich
阿司匹林, meets USP testing specifications
Sigma-Aldrich
L -抗坏血酸, puriss. p.a., ACS reagent, reag. ISO, Ph. Eur., 99.7-100.5% (oxidimetric)
Sigma-Aldrich
非那西丁, ≥98.0% (HPLC)